findCPcli
latest
1. Introduction
2. Installation
3. Pseudocode
4. Compute chokepoints
5. Compute growth dependent chokepoints
6. Remove Dead-End Metabolites
7. Refine model with FVA
8. Tool parameters
9. Low Level API
10. License
findCPcli
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Welcome to findCPcli’s documentation!
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Welcome to findCPcli’s documentation!
¶
1. Introduction
1.1 Chokepoint reactions
1.2. Dead-End Metabolites (DEM)
1.3. Essential reactions
1.4. Example
2. Installation
3. Pseudocode
4. Compute chokepoints
4.1. Spreadsheet data
5. Compute growth dependent chokepoints
5.1. Procedure pseudocode
6. Remove Dead-End Metabolites
7. Refine model with FVA
8. Tool parameters
9. Low Level API
10. License
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